The Dexamethasone Benchmark Resource

Datasets and Code to Evaluate Algorithms for Transcriptomics Data Analysis

graphical abstract

The Dex-Benchmark Resource provides datasets and template workflows needed for benchmarking different tools for gene expression analysis. These datasets include microarray, RNA-seq, L1000, and ChIP-seq data related to dexamethasone and known targets such as NR3C1. Template workflows can be downloaded along with raw data to benchmark a set of gene expression profiles. Example code and visualizations are also provided.