All modules for which code is available

• maayanlab_bioinformatics.api.enrichr
• maayanlab_bioinformatics.api.speedrichr
• maayanlab_bioinformatics.clustering.silhouette_analysis
• maayanlab_bioinformatics.dge.characteristic_direction
• maayanlab_bioinformatics.dge.deseq2
• maayanlab_bioinformatics.dge.limma_voom
• maayanlab_bioinformatics.dge.logfc
• maayanlab_bioinformatics.dge.ttest
• maayanlab_bioinformatics.enrichment.crisp
• maayanlab_bioinformatics.enrichment.gsea2003
• maayanlab_bioinformatics.enrichment.gsea2005
• maayanlab_bioinformatics.harmonization.homologs
• maayanlab_bioinformatics.harmonization.id_mapper
• maayanlab_bioinformatics.harmonization.ncbi_genes
• maayanlab_bioinformatics.harmonization.transcripts
• maayanlab_bioinformatics.normalization.cpm
• maayanlab_bioinformatics.normalization.filter
• maayanlab_bioinformatics.normalization.log
• maayanlab_bioinformatics.normalization.quantile_legacy
• maayanlab_bioinformatics.normalization.zscore
• maayanlab_bioinformatics.parse.gmt
• maayanlab_bioinformatics.parse.suerat
• maayanlab_bioinformatics.plotting.bridge
• maayanlab_bioinformatics.plotting.clustergrammer
• maayanlab_bioinformatics.plotting.upset
• maayanlab_bioinformatics.utils.chunked
• maayanlab_bioinformatics.utils.describe
• maayanlab_bioinformatics.utils.fetch_save_read
• maayanlab_bioinformatics.utils.merge
• maayanlab_bioinformatics.utils.sparse