Index

C

characteristic_direction() (in module maayanlab_bioinformatics.dge.characteristic_direction)

D

description (maayanlab_bioinformatics.api.enrichr.EnrichrUserList property)

E

enrichr_get_top_results() (in module maayanlab_bioinformatics.api.enrichr) enrichr_link_from_genes() (in module maayanlab_bioinformatics.api.enrichr)

enrichr_term_genes() (in module maayanlab_bioinformatics.api.enrichr) EnrichrUserList (class in maayanlab_bioinformatics.api.enrichr)

F

from_url() (maayanlab_bioinformatics.api.enrichr.EnrichrUserList static method)

G

genes (maayanlab_bioinformatics.api.enrichr.EnrichrUserList property)

L

limma_voom_differential_expression() (in module maayanlab_bioinformatics.dge.limma_voom)

limma_voom_differential_expression_design() (in module maayanlab_bioinformatics.dge.limma_voom) link (maayanlab_bioinformatics.api.enrichr.EnrichrUserList property)

M

maayanlab_bioinformatics.api module maayanlab_bioinformatics.api.enrichr module maayanlab_bioinformatics.api.speedrichr module maayanlab_bioinformatics.clustering module maayanlab_bioinformatics.clustering.silhouette_analysis module maayanlab_bioinformatics.dge.characteristic_direction module

maayanlab_bioinformatics.dge.limma_voom module make_design_matrix() (in module maayanlab_bioinformatics.dge.limma_voom) module maayanlab_bioinformatics.api maayanlab_bioinformatics.api.enrichr maayanlab_bioinformatics.api.speedrichr maayanlab_bioinformatics.clustering maayanlab_bioinformatics.clustering.silhouette_analysis maayanlab_bioinformatics.dge.characteristic_direction maayanlab_bioinformatics.dge.limma_voom

S

shortId (maayanlab_bioinformatics.api.enrichr.EnrichrUserList property)

silhouette_analysis() (in module maayanlab_bioinformatics.clustering.silhouette_analysis) speedenrich() (in module maayanlab_bioinformatics.api.speedrichr)

U

up_down_from_characteristic_direction() (in module maayanlab_bioinformatics.dge.characteristic_direction)

up_down_from_limma_voom() (in module maayanlab_bioinformatics.dge.limma_voom) userListId (maayanlab_bioinformatics.api.enrichr.EnrichrUserList property)